**************************************************** Worst vs Least[30402457, 2,-2,50000] [1] 94 36 [1] "Missing value rows excluded = 30 (31.9%)" [1] "Missing value columns would have been = 21 (58.3%)" Classifier 0 1 41 23 SNPs are coded as follows: SNP SNP_1 SNP_2 Assumed Genotype 1 1 0 0 Homozygous Reference 2 2 1 0 Heterozygous 3 3 1 1 Homozygous Variant [1] 64 72 Bagged Logic Regression Number of Iterations: 750 Logic Regression Type: Classification Max. Number of Leaves: 40 OOB Error Rate: 29.69% The 21 Most Important Interactions: Importance Proportion 1 1.91 0.0013 2 1.87 0.0013 3 1.75 0.0013 4 1.75 0.0013 5 1.73 0.0013 6 1.70 0.0267 7 1.70 0.0173 8 1.68 0.0027 9 1.67 0.0653 10 1.65 0.0013 11 1.64 0.0213 12 1.63 0.0200 13 1.61 0.0013 14 1.60 0.0013 15 1.60 0.0027 16 1.59 0.0013 17 1.59 0.0013 18 1.57 0.0013 19 1.57 0.0013 20 1.55 0.0013 21 1.55 0.0013 Expression 1 TPH2.hCV8376042_1 & !TH.hCV243542_2 & !COMT.hCV11804650_2 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 2 TPH2.hCV15836061_1 & !TH.hCV243542_2 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 3 COMT.hCV2538747_1 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 4 COMT.hCV2538747_1 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV8950998_2 5 !COMT.hCV11804650_2 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 6 TPH2.hCV8376042_1 & POMC.hCV3227244_2 & !NR3C1.hCV1046360_1 7 TPH2.hCV8376042_1 & POMC.hCV3227244_2 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV1046360_1 8 TPH2.hCV8376042_1 & POMC.hCV3227244_2 & CRHR2.hCV15960586_1 & !NR3C1.hCV1046360_1 9 POMC.hCV3227244_2 & !NR3C1.hCV1046360_1 10 TPH2.hCV8376042_1 & !COMT.hCV2539273_2 & POMC.hCV3227244_2 & !NR3C1.hCV1046360_1 11 POMC.hCV3227244_2 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV1046360_1 12 POMC.hCV3227244_2 & CRHR2.hCV15960586_1 & !NR3C1.hCV1046360_1 13 !COMT.hCV2539306_2 & CRHR1.hCV2257689_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 14 POMC.hCV3227244_2 & CRHR2.hCV15960586_1 & !NR3C1.hCV1046360_1 & !NR3C1.hCV1046360_2 15 POMC.hCV3227244_2 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV11159943_2 & !NR3C1.hCV1046360_1 16 TPH2.hCV8376173_1 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 17 !SLC6A4.hCV7911132_2 & !COMT.hCV11804654_2 & CRHR1.CRHR1.7450777_2 & !CRHR1.hCV2544830_2 18 !COMT.hCV2539273_2 & POMC.hCV3227244_2 & !NR3C1.hCV1046360_1 19 POMC.hCV3227244_2 & NR3C1.hCV8950988_1 & !NR3C1.hCV1046360_1 20 !COMT.hCV11804654_2 & POMC.hCV3227244_2 & CRHR2.hCV15960586_1 & !NR3C1.hCV1046360_1 21 !SLC6A4.hCV7911132_2 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV11159943_1 & NR3C1.hCV8950988_2 Misclassification rate = 1.56% **************************************************** Worst vs Least (Females Only)[30402457, 2,-2,50000] [1] 76 42 [1] "Missing value rows excluded = 23 (30.3%)" [1] "Missing value columns would have been = 18 (42.9%)" Classifier 0 1 32 21 SNPs are coded as follows: SNP SNP_1 SNP_2 Assumed Genotype 1 1 0 0 Homozygous Reference 2 2 1 0 Heterozygous 3 3 1 1 Homozygous Variant [1] 53 84 Bagged Logic Regression Number of Iterations: 750 Logic Regression Type: Classification Max. Number of Leaves: 40 OOB Error Rate: 39.62% The 20 Most Important Interactions: Importance Proportion 1 2.22 0.0013 2 2.10 0.0013 3 2.07 0.0013 4 2.07 0.0013 5 2.04 0.0013 6 2.01 0.0013 7 2.00 0.0013 8 2.00 0.0013 9 2.00 0.0013 10 1.97 0.0040 11 1.96 0.0013 12 1.94 0.0013 13 1.93 0.0013 14 1.92 0.0013 15 1.91 0.0013 16 1.88 0.0013 17 1.85 0.0013 18 1.84 0.0013 19 1.83 0.0013 20 1.83 0.0013 Expression 1 TPH2.hCV15836061_1 & !MAOB.hCV8878790_2 & CRHR1.hCV2544836_1 & !NR3C1.hCV11159943_2 2 SLC6A4.hCV7911143_1 & !MAOB.hCV8878790_2 & CRHR1.hCV2544836_1 & !CRHR1.hCV2544830_2 & !NR3C1.hCV11159943_2 3 SLC6A4.hCV1841702_1 & MAOB.hCV15763403_2 & MAOB.hCV15959461_1 & POMC.hCV3227244_2 & CRHR1.hCV2544830_1 & !NR3C1.hCV11159943_2 4 MAOB.hCV15763403_2 & !MAOB.hCV8878790_2 & POMC.hCV3227244_2 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV1046360_2 5 MAOB.hCV15763403_2 & !MAOB.hCV8878790_2 & POMC.hCV3227244_2 & !NR3C1.hCV1046360_2 6 TPH2.hCV11407441_1 & !SLC6A4.hCV7911132_2 & !COMT.hCV3274705_1 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV8950998_2 7 TPH2.hCV11407441_1 & !SLC6A4.hCV7911132_2 & !COMT.hCV2539273_1 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV8950998_2 8 TPH2.hCV11407441_1 & !MAOB.hCV8878790_2 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 9 !MAOB.hCV8878790_2 & CRHR1.hCV2544836_1 & !CRHR2.hCV11823513_2 & !NR3C1.hCV11159943_2 10 !MAOB.hCV8878790_2 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 11 TPH2.hCV8376042_1 & MAOB.hCV15763403_1 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV11159943_1 12 !MAOB.hCV8878790_2 & CRHR1.hCV2544836_1 & !CRHR1.hCV2544830_2 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 13 !MAOB.hCV8878790_2 & COMT.hCV11804654_1 & CRHR1.hCV2544836_1 & !CRHR2.hCV15960586_2 & !NR3C1.hCV11159943_2 14 TPH2.hCV8376042_1 & MAOB.hCV15763403_1 & !NR3C1.hCV11159943_1 15 TPH2.hCV245410_1 & MAOB.hCV15763403_1 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV11159943_1 16 MAOB.hCV8878790_1 & !TH.hCV243542_2 & COMT.hCV11804654_1 & !NR3C1.hCV11159943_1 17 MAOB.hCV15763403_2 & !MAOB.hCV8878790_2 & POMC.hCV3227244_2 & CRHR1.hCV2544836_1 & !NR3C1.hCV11159943_2 18 SLC6A4.hCV1841702_1 & MAOB.hCV15763403_1 & CRHR1.hCV2544836_1 & !CRHR2.hCV11823513_2 & !NR3C1.hCV11159943_2 19 MAOB.hCV15763403_2 & MAOB.hCV15959461_1 & POMC.hCV3227244_2 & CRHR1.hCV2544830_1 & NR3C1.hCV1046353_1 20 MAOB.hCV15763403_2 & POMC.hCV3227244_2 & CRHR1.hCV2544830_1 & !NR3C1.hCV1046360_2 Misclassification rate = 0.00% **************************************************** Middle vs Least[30402457, 2,-2,50000] [1] 130 36 [1] "Missing value rows excluded = 42 (32.3%)" [1] "Missing value columns would have been = 24 (66.7%)" Classifier 0 1 41 47 SNPs are coded as follows: SNP SNP_1 SNP_2 Assumed Genotype 1 1 0 0 Homozygous Reference 2 2 1 0 Heterozygous 3 3 1 1 Homozygous Variant [1] 88 72 Bagged Logic Regression Number of Iterations: 750 Logic Regression Type: Classification Max. Number of Leaves: 40 OOB Error Rate: 50% The 20 Most Important Interactions: Importance Proportion Expression 1 2.96 0.0013 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911132_2 & !TH.hCV243542_2 & CRHR1.CRHR1.7450777_1 2 2.96 0.0067 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911132_2 & !TH.hCV243542_2 3 2.93 0.0080 SLC6A4.hCV7911132_1 & POMC.hCV3227244_2 4 2.91 0.0240 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911132_2 5 2.89 0.0027 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911143_2 & POMC.hCV3227244_2 6 2.89 0.0013 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911132_2 & CRHR1.CRHR1.7450777_1 7 2.86 0.0067 SLC6A4.hCV7911132_1 & SLC6A4.hCV7911143_1 & !TH.hCV243542_2 8 2.85 0.0013 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911132_2 & !COMT.hCV2539273_2 9 2.82 0.0040 SLC6A4.hCV7911132_1 & POMC.hCV3227244_2 & CRHR1.hCV2544830_1 & CRHR1.hCV2257689_1 10 2.81 0.0027 SLC6A4.hCV7911132_1 & !TH.hCV243542_2 & POMC.hCV3227244_2 11 2.80 0.0067 SLC6A4.hCV7911132_1 & !COMT.hCV2539273_2 & POMC.hCV3227244_2 12 2.80 0.0027 SLC6A4.hCV7911132_1 & CRHR1.hCV2257689_1 13 2.80 0.0147 SLC6A4.hCV7911132_1 & SLC6A4.hCV7911143_1 14 2.78 0.0013 TPH2.hCV8376146_1 & SLC6A4.hCV7911132_1 & !TH.hCV243542_2 15 2.78 0.0013 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911143_2 & !TH.hCV243542_2 & POMC.hCV3227244_2 16 2.78 0.0013 SLC6A4.hCV7911132_1 & CRHR1.hCV2544830_1 & CRHR1.hCV2257689_1 17 2.73 0.0013 SLC6A4.hCV7911132_1 & SLC6A4.hCV7911143_1 & !TH.hCV243542_2 & !COMT.hCV2539273_2 18 2.70 0.0013 TPH2.hCV11407441_1 & SLC6A4.hCV7911132_1 & !TH.hCV243542_2 & !CRHR2.hCV15872871_2 19 2.69 0.0093 SLC6A4.hCV7911132_1 & POMC.hCV3227244_2 & CRHR1.hCV2257689_1 20 2.68 0.0027 SLC6A4.hCV7911132_1 & !COMT.hCV2539273_2 & POMC.hCV3227244_2 & CRHR1.hCV2257689_1 Misclassification rate = 5.68% **************************************************** Worst vs Middle[30402457, 2,-2,50000] [1] 96 36 [1] "Missing value rows excluded = 26 (27.1%)" [1] "Missing value columns would have been = 20 (55.6%)" Classifier 0 1 47 23 SNPs are coded as follows: SNP SNP_1 SNP_2 Assumed Genotype 1 1 0 0 Homozygous Reference 2 2 1 0 Heterozygous 3 3 1 1 Homozygous Variant [1] 70 72 Bagged Logic Regression Number of Iterations: 750 Logic Regression Type: Classification Max. Number of Leaves: 40 OOB Error Rate: 37.14% The 20 Most Important Interactions: Importance Proportion 1 2.20 0.0013 2 2.20 0.0013 3 2.15 0.0013 4 2.14 0.0013 5 2.10 0.0013 6 2.10 0.0013 7 2.09 0.0013 8 2.08 0.0013 9 2.08 0.0013 10 2.03 0.0013 11 2.01 0.0027 12 2.00 0.0013 13 2.00 0.0013 14 1.94 0.0027 15 1.94 0.0013 16 1.93 0.0013 17 1.91 0.0013 18 1.91 0.0013 19 1.90 0.0013 20 1.89 0.0013 Expression 1 TPH2.hCV8376173_1 & !TH.hCV243542_1 & !CRHR1.hCV2544830_2 & !NR3C1.hCV11159943_2 & !NR3C1.hCV1046360_1 2 TPH2.hCV15836061_1 & !TH.hCV243542_1 & !CRHR1.hCV2544830_2 & !NR3C1.hCV1046360_1 3 TPH2.hCV8376042_1 & !TH.hCV243542_1 & !COMT.hCV2539273_2 & !NR3C1.hCV1046360_1 4 TPH2.hCV8376042_1 & !TH.hCV243542_2 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 5 TPH2.hCV245410_1 & !TH.hCV243542_1 & !COMT.hCV2539273_2 & !NR3C1.hCV1046360_1 6 TPH2.hCV8376173_1 & !TH.hCV243542_1 & !COMT.hCV2539273_2 & !NR3C1.hCV1046360_1 7 TPH2.hCV8376042_1 & !TH.hCV243542_2 & !COMT.hCV11804654_2 & !COMT.hCV3274705_1 & POMC.hCV3227244_2 & !NR3C1.hCV11159943_2 8 TPH2.hCV8376146_1 & !TH.hCV243542_2 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 9 TPH2.hCV15836061_1 & !TH.hCV243542_2 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 10 TPH2.hCV8872233_1 & !TH.hCV243542_1 & !CRHR1.hCV2544830_2 & !NR3C1.hCV1046360_1 11 TPH2.hCV245410_1 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 12 TPH2.hCV245410_1 & !COMT.hCV2539273_2 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 13 TPH2.hCV8376042_1 & TPH2.hCV245410_1 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 14 TPH2.hCV245410_1 & !CRHR1.hCV2544830_2 & !NR3C1.hCV1046360_1 15 TPH2.hCV245410_1 & !TH.hCV243542_1 & !CRHR1.hCV2544830_2 & !NR3C1.hCV11159943_2 & !NR3C1.hCV1046360_1 16 TPH2.hCV8872233_1 & !TH.hCV243542_1 & !COMT.hCV2539273_2 & !NR3C1.hCV11159943_2 & !NR3C1.hCV1046360_1 17 TPH2.hCV8376042_1 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 18 TPH2.hCV11407441_1 & !COMT.hCV3274705_1 & !NR3C1.hCV1046360_1 19 TPH2.hCV15836061_1 & !TH.hCV243542_1 & COMT.hCV11804654_1 & !CRHR1.hCV2544830_2 & !NR3C1.hCV1046360_1 20 TPH2.hCV11407441_1 & !COMT.hCV3274705_1 & POMC.hCV3227244_2 & !NR3C1.hCV1046360_1 Misclassification rate = 7.14% **************************************************** Sick (Worst + Middle) vs Least[30402457, 2,-2,50000] [1] 160 36 [1] "Missing value rows excluded = 49 (30.6%)" [1] "Missing value columns would have been = 25 (69.4%)" Classifier 0 1 41 70 SNPs are coded as follows: SNP SNP_1 SNP_2 Assumed Genotype 1 1 0 0 Homozygous Reference 2 2 1 0 Heterozygous 3 3 1 1 Homozygous Variant [1] 111 72 Bagged Logic Regression Number of Iterations: 750 Logic Regression Type: Classification Max. Number of Leaves: 40 OOB Error Rate: 42.34% The 20 Most Important Interactions: Importance Proportion Expression 1 3.17 0.0013 TPH2.hCV8376146_1 & !TH.hCV243542_2 & !COMT.hCV2539273_2 2 3.03 0.0013 TPH2.hCV8872233_1 & !TH.hCV243542_2 & !NR3C1.hCV8950998_2 3 2.97 0.0133 !SLC6A4.hCV7911143_2 & POMC.hCV3227244_2 4 2.93 0.0067 SLC6A4.hCV7911132_1 & CRHR1.hCV2257689_1 5 2.92 0.0013 !COMT.hCV2539273_2 & CRHR1.hCV2544830_1 & !CRHR1.hCV2544830_2 6 2.90 0.0013 SLC6A4.hCV7911132_1 & !COMT.hCV2539273_2 & CRHR1.hCV2257689_1 7 2.90 0.0253 SLC6A4.hCV7911132_1 & POMC.hCV3227244_2 8 2.89 0.0013 TPH2.hCV8376173_1 & SLC6A4.hCV7911132_1 9 2.89 0.0013 TPH2.hCV245410_1 & !TH.hCV243542_2 & !COMT.hCV2539273_2 10 2.87 0.0027 !TH.hCV243542_2 & !CRHR2.hCV11823513_2 & !NR3C1.hCV1046360_2 11 2.86 0.0027 SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911143_2 & POMC.hCV3227244_2 12 2.84 0.0013 POMC.hCV3227244_2 13 2.82 0.0013 !SLC6A4.hCV7911132_2 & CRHR1.CRHR1.7450777_1 14 2.80 0.0053 POMC.hCV3227244_2 & !CRHR1.hCV2544830_2 15 2.80 0.0013 TPH2.hCV8376173_1 & !NR3C1.hCV1046360_2 16 2.79 0.0027 SLC6A4.hCV7911132_1 & !TH.hCV243542_2 & POMC.hCV3227244_2 17 2.78 0.0027 SLC6A4.hCV7911132_1 & !COMT.hCV2539273_2 & POMC.hCV3227244_2 18 2.77 0.0027 TPH2.hCV8376042_1 & SLC6A4.hCV7911132_1 & NR3C1.hCV1046353_1 19 2.77 0.0027 !SLC6A4.hCV7911132_2 & CRHR1.CRHR1.7450777_1 & !CRHR1.hCV2544830_2 20 2.76 0.0013 !SLC6A4.hCV7911132_2 & !TH.hCV243542_2 & CRHR1.CRHR1.7450777_1 Misclassification rate = 10.81% **************************************************** Sick: Female vs Male[30402457, 2,-2,50000] [1] 96 36 [1] "Missing value rows excluded = 26 (27.1%)" [1] "Missing value columns would have been = 20 (55.6%)" Classifier 0 1 60 10 SNPs are coded as follows: SNP SNP_1 SNP_2 Assumed Genotype 1 1 0 0 Homozygous Reference 2 2 1 0 Heterozygous 3 3 1 1 Homozygous Variant [1] 70 72 Bagged Logic Regression Number of Iterations: 750 Logic Regression Type: Classification Max. Number of Leaves: 40 OOB Error Rate: 17.14% The 20 Most Important Interactions: Importance Proportion 1 1.30 0.0013 2 1.28 0.0013 3 1.26 0.0013 4 1.21 0.0027 5 1.21 0.0013 6 1.21 0.0013 7 1.20 0.0013 8 1.19 0.0013 9 1.19 0.0013 10 1.08 0.0040 11 1.08 0.0013 12 1.08 0.0013 13 1.08 0.0013 14 1.08 0.0013 15 1.08 0.0027 16 1.08 0.0027 17 1.08 0.0013 18 1.08 0.0013 19 1.08 0.0013 20 1.07 0.0027 Expression 1 TPH2.hCV245410_1 & !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & COMT.hCV2539273_1 & CRHR2.hCV15960586_2 2 TPH2.hCV8376146_1 & !TPH2.hCV245410_2 & COMT.hCV2539273_1 & !COMT.hCV3274705_2 & CRHR2.hCV15960586_2 & !NR3C1.hCV1046360_2 3 !TPH2.hCV8376173_2 & TPH2.hCV245410_1 & COMT.hCV2539273_1 & !COMT.hCV3274705_2 & !CRHR1.hCV1570087_2 & CRHR2.hCV15960586_2 4 !TPH2.hCV11407441_1 & !SLC6A4.hCV1841702_2 & !TH.hCV243542_2 & CRHR1.hCV1570087_1 5 !TPH2.hCV8872233_2 & !TPH2.hCV11407441_1 & !SLC6A4.hCV1841702_2 & SLC6A4.hCV7911132_1 & !SLC6A4.hCV7911143_2 6 !TPH2.hCV11407441_1 & !SLC6A4.hCV1841702_2 & !SLC6A4.hCV7911143_2 & !TH.hCV243542_2 7 !TPH2.hCV11407441_2 & CRHR2.hCV15960586_2 & !NR3C1.hCV8950988_2 & !NR3C1.hCV1046360_2 8 !TPH2.hCV8376146_2 & !TPH2.hCV11407441_1 & !TH.hCV243542_2 & CRHR1.hCV2544836_1 9 !TPH2.hCV11407441_1 & !TPH2.hCV11407441_2 & !TH.hCV243542_2 & CRHR1.hCV2544830_1 & !NR3C1.hCV1046360_2 10 !TPH2.hCV11407441_1 & CRHR1.hCV1570087_1 & !NR3C1.hCV1046360_1 11 !TPH2.hCV11407441_1 & !CRHR1.hCV2544843_2 & !NR3C1.hCV1046360_1 12 !TPH2.hCV11407441_1 & !TH.hCV243542_2 & !NR3C1.hCV1046360_1 13 !TPH2.hCV11407441_1 & POMC.hCV3227244_1 & !NR3C1.hCV1046360_1 14 !TPH2.hCV11407441_1 & !NR3C1.hCV1046360_1 & !NR3C1.hCV1046360_2 15 !TPH2.hCV11407441_1 & CRHR1.CRHR1.7450777_1 & !NR3C1.hCV1046360_1 16 !TPH2.hCV8376146_2 & !TPH2.hCV11407441_1 & !NR3C1.hCV1046360_1 17 !TPH2.hCV11407441_1 & !COMT.hCV2539273_2 & !NR3C1.hCV1046360_1 18 !TPH2.hCV11407441_1 & !TPH2.hCV11407441_2 & !TH.hCV243542_2 & !NR3C1.hCV1046360_1 19 !TPH2.hCV11407441_1 & CRHR1.hCV2544836_1 & !NR3C1.hCV1046360_1 20 !TPH2.hCV11407441_1 & POMC.hCV3227244_2 & !NR3C1.hCV1046360_1 Misclassification rate = 4.29% **************************************************** Random Classification[30402457, 2,-2,50000] [1] 160 36 [1] "Missing value rows excluded = 49 (30.6%)" [1] "Missing value columns would have been = 25 (69.4%)" Classifier 0 1 56 55 SNPs are coded as follows: SNP SNP_1 SNP_2 Assumed Genotype 1 1 0 0 Homozygous Reference 2 2 1 0 Heterozygous 3 3 1 1 Homozygous Variant [1] 111 72 Bagged Logic Regression Number of Iterations: 750 Logic Regression Type: Classification Max. Number of Leaves: 40 OOB Error Rate: 54.95% The 20 Most Important Interactions: Importance Proportion 1 3.19 0.0013 2 3.14 0.0013 3 3.06 0.0013 4 3.04 0.0013 5 3.04 0.0027 6 3.04 0.0027 7 3.02 0.0053 8 3.01 0.0013 9 2.99 0.0013 10 2.97 0.0013 11 2.95 0.0013 12 2.94 0.0013 13 2.94 0.0013 14 2.94 0.0027 15 2.94 0.0013 16 2.91 0.0013 17 2.90 0.0040 18 2.88 0.0013 19 2.87 0.0013 20 2.86 0.0013 Expression 1 !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & !CRHR1.hCV2544836_2 & CRHR2.hCV15960586_1 & !NR3C1.hCV1046360_2 2 !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & POMC.hCV3227244_1 & !NR3C1.hCV1046360_2 3 SLC6A4.hCV1841702_1 & SLC6A4.hCV7911132_1 & !COMT.hCV2539273_1 & POMC.hCV3227244_1 4 !TPH2.hCV8872233_2 & !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & COMT.hCV2538747_1 5 !TPH2.hCV8872233_2 & !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & !CRHR1.hCV2544836_2 6 !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & !CRHR1.hCV2544836_2 & NR3C1.hCV1046353_1 7 TPH2.hCV15836061_1 & SLC6A4.hCV1841702_1 & !SLC6A4.hCV7911143_2 & !COMT.hCV2539273_1 8 TPH2.hCV8376146_1 & !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & POMC.hCV3227244_1 & CRHR2.hCV15872871_1 9 !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & !CRHR1.hCV1570087_2 & !NR3C1.hCV1046360_2 10 !TPH2.hCV8376042_2 & !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & !COMT.hCV2539306_2 11 !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 12 TPH2.hCV8376173_1 & SLC6A4.hCV1841702_1 & SLC6A4.hCV7911132_1 & !COMT.hCV2539273_1 13 TPH2.hCV8376146_1 & SLC6A4.hCV1841702_1 & SLC6A4.hCV7911132_1 & !COMT.hCV2539273_1 14 TPH2.hCV15836061_1 & SLC6A4.hCV1841702_1 & SLC6A4.hCV7911132_1 & !COMT.hCV2539273_1 15 SLC6A4.hCV1841702_1 & !SLC6A4.hCV7911143_2 & !COMT.hCV2539273_1 & POMC.hCV3227244_1 16 !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & COMT.hCV2538747_1 & POMC.hCV3227244_1 17 SLC6A4.hCV1841702_1 & SLC6A4.hCV7911132_1 & !COMT.hCV2539273_1 18 SLC6A4.hCV1841702_1 & !CRHR1.hCV2544836_2 & CRHR2.hCV15872871_1 & NR3C1.hCV1046353_1 & !NR3C1.hCV1046360_2 19 !TPH2.hCV15836061_2 & !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & !CRHR1.hCV2544836_2 & !NR3C1.hCV1046360_2 20 !TPH2.hCV15836061_2 & !TPH2.hCV245410_2 & SLC6A4.hCV1841702_1 & !CRHR1.hCV2544836_2 & NR3C1.hCV1046353_1 Misclassification rate = 3.60% 13575.58 2975.97 17456.66