Least Middle Worst 64 66 30 Worst Vs. Least SNP freq_CS freq_CN Pvalue Pvalue_perm PvalAdj TPH2.hCV15836061 0.276 0.441 0.052 0.047 0.546 TPH2.hCV8376173 0.317 0.414 0.263 0.259 0.806842105 TPH2.hCV8376146 0.317 0.414 0.263 0.258 0.806842105 TPH2.hCV8376042 0.283 0.391 0.205 0.191 0.806842105 TPH2.hCV8872233 0.317 0.391 0.413 0.329 0.836 TPH2.hCV11407441 0.283 0.391 0.205 0.195 0.806842105 TPH2.hCV245410 0.433 0.523 0.32 0.264 0.806842105 SLC6A4.hCV1841702 0.4 0.398 0.889 1 0.950634146 SLC6A4.hCV7911132 0.55 0.375 0.036 0.026 0.504 SLC6A4.hCV7911143 0.567 0.651 0.345 0.333 0.806842105 MAOA.hCV8878813 0.6 0.68 0.365 0.324 0.806842105 MAOA.hCV8878819 0.4 0.32 0.365 0.324 0.806842105 MAOA.hCV8878818 0.4 0.313 0.31 0.247 0.806842105 MAOB.hCV15763403 0.161 0.175 0.987 0.838 0.987 MAOB.hCV15959461 0.328 0.286 0.687 0.601 0.946235294 MAOB.hCV8878790 0.517 0.556 0.745 0.635 0.946235294 TH.hCV243542 0.759 0.698 0.505 0.494 0.872307692 TH.hCV1843075 0.517 0.46 0.574 0.527 0.892888889 COMT.hCV11804650 0.638 0.587 0.624 0.52 0.936 COMT.hCV11804654 0.467 0.531 0.503 0.429 0.872307692 COMT.hCV2538746 0.367 0.406 0.721 0.635 0.946235294 COMT.hCV2538747 0.417 0.492 0.418 0.347 0.836 COMT.hCV2539306 0.567 0.531 0.766 0.751 0.946235294 COMT.hCV2539273 0.767 0.766 0.866 1 0.950634146 COMT.hCV3274705 0.783 0.833 0.54 0.529 0.872307692 POMC.hCV3227244 0.172 0.172 0.841 1 0.950634146 CRHR1.hCV2544843 0.467 0.445 0.907 0.883 0.950634146 CRHR1.CRHR1.7450777 0.15 0.238 0.235 0.185 0.806842105 CRHR1.hCV2544836 0.482 0.516 0.795 0.744 0.950634146 CRHR1.hCV2544830 0.414 0.419 0.928 1 0.950634146 CRHR1.hCV2257689 0.517 0.565 0.662 0.634 0.946235294 CRHR1.hCV1570087 0.533 0.556 0.899 0.878 0.950634146 CRHR2.hCV15872871 0.283 0.317 0.763 0.73 0.946235294 CRHR2.hCV11823513 0.433 0.365 0.464 0.422 0.872307692 CRHR2.hCV15960586 0.233 0.183 0.539 0.438 0.872307692 NR3C1.hCV11837659 0.117 0.222 0.128 0.107 0.672 NR3C1.hCV11159943 0.793 0.597 0.015 0.012 0.399 NR3C1.hCV8950988 0.117 0.222 0.128 0.108 0.672 NR3C1.hCV8950998 0.717 0.578 0.096 0.078 0.672 NR3C1.hCV1046361 0.883 0.806 0.273 0.218 0.806842105 NR3C1.hCV1046353 0.276 0.406 0.122 0.098 0.672 NR3C1.hCV1046360 0.75 0.557 0.019 0.013 0.399 ------- ------ ------- -------------------------------------- Middle vs. Least TPH2.hCV15836061 0.492 0.441 0.492 0.452 0.88704 TPH2.hCV8376173 0.455 0.414 0.594 0.533 0.913818182 TPH2.hCV8376146 0.447 0.414 0.681 0.615 0.913818182 TPH2.hCV8376042 0.409 0.391 0.859 0.798 0.953842105 TPH2.hCV8872233 0.417 0.391 0.763 0.704 0.915833333 TPH2.hCV11407441 0.402 0.391 0.958 0.902 0.981365854 TPH2.hCV245410 0.561 0.523 0.633 0.624 0.913818182 SLC6A4.hCV1841702 0.417 0.398 0.863 0.799 0.953842105 SLC6A4.hCV7911132 0.408 0.375 0.682 0.606 0.913818182 SLC6A4.hCV7911143 0.591 0.651 0.388 0.36 0.88704 MAOA.hCV8878813 0.614 0.68 0.325 0.301 0.88704 MAOA.hCV8878819 0.379 0.32 0.391 0.371 0.88704 MAOA.hCV8878818 0.377 0.313 0.338 0.296 0.88704 MAOB.hCV15763403 0.235 0.175 0.297 0.279 0.88704 MAOB.hCV15959461 0.22 0.286 0.281 0.255 0.88704 MAOB.hCV8878790 0.5 0.556 0.442 0.392 0.88704 TH.hCV243542 0.669 0.698 0.713 0.694 0.913818182 TH.hCV1843075 0.523 0.46 0.379 0.305 0.88704 COMT.hCV11804650 0.636 0.587 0.496 0.443 0.88704 COMT.hCV11804654 0.538 0.531 0.993 1 0.993 COMT.hCV2538746 0.371 0.406 0.651 0.6 0.913818182 COMT.hCV2538747 0.424 0.492 0.33 0.32 0.88704 COMT.hCV2539306 0.591 0.531 0.399 0.387 0.88704 COMT.hCV2539273 0.682 0.766 0.17 0.169 0.88704 COMT.hCV3274705 0.708 0.833 0.028 0.024 0.88704 POMC.hCV3227244 0.197 0.172 0.718 0.633 0.913818182 CRHR1.hCV2544843 0.492 0.445 0.528 0.454 0.88704 CRHR1.CRHR1.7450777 0.215 0.238 0.776 0.765 0.915833333 CRHR1.hCV2544836 0.531 0.516 0.91 0.899 0.98 CRHR1.hCV2544830 0.423 0.419 0.947 1 0.981365854 CRHR1.hCV2257689 0.516 0.565 0.514 0.45 0.88704 CRHR1.hCV1570087 0.531 0.556 0.785 0.704 0.915833333 CRHR2.hCV15872871 0.377 0.317 0.386 0.364 0.88704 CRHR2.hCV11823513 0.424 0.365 0.399 0.372 0.88704 CRHR2.hCV15960586 0.242 0.183 0.307 0.28 0.88704 NR3C1.hCV11837659 0.182 0.222 0.513 0.445 0.88704 NR3C1.hCV11159943 0.667 0.597 0.31 0.297 0.88704 NR3C1.hCV8950988 0.182 0.222 0.513 0.445 0.88704 NR3C1.hCV8950998 0.672 0.578 0.156 0.161 0.88704 NR3C1.hCV1046361 0.836 0.806 0.655 0.627 0.913818182 NR3C1.hCV1046353 0.331 0.406 0.259 0.241 0.88704 NR3C1.hCV1046360 0.662 0.557 0.117 0.099 0.88704 Sick Vs. Least TPH2.hCV15836061 0.426 0.441 0.887 0.815 0.981 TPH2.hCV8376173 0.411 0.414 0.945 1 0.981 TPH2.hCV8376146 0.406 0.414 0.981 0.909 0.981 TPH2.hCV8376042 0.37 0.391 0.796 0.718 0.981 TPH2.hCV8872233 0.385 0.391 0.981 1 0.981 TPH2.hCV11407441 0.365 0.391 0.724 0.723 0.981 TPH2.hCV245410 0.521 0.523 0.945 1 0.981 SLC6A4.hCV1841702 0.411 0.398 0.908 0.913 0.981 SLC6A4.hCV7911132 0.453 0.375 0.208 0.204 0.8505 SLC6A4.hCV7911143 0.583 0.651 0.276 0.243 0.8505 MAOA.hCV8878813 0.609 0.68 0.245 0.238 0.8505 MAOA.hCV8878819 0.385 0.32 0.285 0.286 0.8505 MAOA.hCV8878818 0.384 0.313 0.234 0.238 0.8505 MAOB.hCV15763403 0.213 0.175 0.491 0.464 0.85925 MAOB.hCV15959461 0.253 0.286 0.602 0.521 0.936444444 MAOB.hCV8878790 0.505 0.556 0.446 0.429 0.851454545 TH.hCV243542 0.697 0.698 0.924 1 0.981 TH.hCV1843075 0.521 0.46 0.345 0.306 0.851454545 COMT.hCV11804650 0.637 0.587 0.442 0.412 0.851454545 COMT.hCV11804654 0.516 0.531 0.876 0.822 0.981 COMT.hCV2538746 0.37 0.406 0.59 0.56 0.936444444 COMT.hCV2538747 0.422 0.492 0.261 0.253 0.8505 COMT.hCV2539306 0.583 0.531 0.421 0.419 0.851454545 COMT.hCV2539273 0.708 0.766 0.315 0.307 0.8505 COMT.hCV3274705 0.732 0.833 0.053 0.049 0.6825 POMC.hCV3227244 0.189 0.172 0.802 0.765 0.981 CRHR1.hCV2544843 0.484 0.445 0.571 0.568 0.936444444 CRHR1.CRHR1.7450777 0.195 0.238 0.434 0.397 0.851454545 CRHR1.hCV2544836 0.516 0.516 0.912 1 0.981 CRHR1.hCV2544830 0.42 0.419 0.919 1 0.981 CRHR1.hCV2257689 0.516 0.565 0.471 0.412 0.85925 CRHR1.hCV1570087 0.532 0.556 0.761 0.73 0.981 CRHR2.hCV15872871 0.347 0.317 0.667 0.629 0.981 CRHR2.hCV11823513 0.427 0.365 0.324 0.285 0.8505 CRHR2.hCV15960586 0.24 0.183 0.286 0.27 0.8505 NR3C1.hCV11837659 0.161 0.222 0.224 0.186 0.8505 NR3C1.hCV11159943 0.707 0.597 0.061 0.053 0.6825 NR3C1.hCV8950988 0.161 0.222 0.224 0.185 0.8505 NR3C1.hCV8950998 0.686 0.578 0.065 0.056 0.6825 NR3C1.hCV1046361 0.851 0.806 0.379 0.357 0.851454545 NR3C1.hCV1046353 0.314 0.406 0.117 0.095 0.8505 NR3C1.hCV1046360 0.689 0.557 0.025 0.022 0.6825